SMTL ID : 6ans.1 (1 other biounit)

Crystal structure of a putative uncharacterized protein from Burkholderia cenocepacia

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

homo-dimer

Ligands

2 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 10 residues within 4Å: Chain A: A.104, N.109, Y.111, R.194, I.276, Y.278, R.366 Ligands: NA.2, GOL.3, EDO.4 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:N.109, A:Y.111, A:Y.111, A:Y.278, A:Y.278 Water bridges: A:N.106, A:N.106 Salt bridges: A:R.194, A:R.366 PO4.6: 10 residues within 4Å: Chain B: A.104, N.109, Y.111, R.194, I.276, Y.278, R.366 Ligands: NA.7, GOL.8, EDO.9 9 PLIP interactions: 9 interactions with chain B Hydrogen bonds: B:N.109, B:Y.111, B:Y.111, B:Y.111, B:Y.278, B:Y.278 Water bridges: B:N.106 Salt bridges: B:R.194, B:R.366

3 x NA: SODIUM ION(Non-functional Binders)

NA.2: 6 residues within 4Å: Chain A: G.103, A.104, D.105 Ligands: PO4.1, GOL.3, EDO.4 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:A.104, A:R.366 NA.5: 2 residues within 4Å: Chain B: N.109, L.110 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:N.109, B:R.200 NA.7: 6 residues within 4Å: Chain B: G.103, A.104, D.105 Ligands: PO4.6, GOL.8, EDO.9 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:A.104

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 9 residues within 4Å: Chain A: I.102, G.103, A.104, D.105, Y.111, Y.143 Ligands: PO4.1, NA.2, EDO.4 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Y.111, A:Y.143, A:Y.143 GOL.8: 9 residues within 4Å: Chain B: I.102, G.103, A.104, D.105, Y.111, Y.143 Ligands: PO4.6, NA.7, EDO.9 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:A.104, B:Y.143, B:Y.143

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.4: 8 residues within 4Å: Chain A: G.103, C.267, V.270, Y.278, H.280 Ligands: PO4.1, NA.2, GOL.3 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:G.103 EDO.9: 7 residues within 4Å: Chain B: G.103, C.267, Y.278, H.280 Ligands: PO4.6, NA.7, GOL.8 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:G.103, B:Y.278

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bowatte, K. et al., Crystal structure of a putative uncharacterized protein from Burkholderia cenocepacia. To be Published

Release Date

2017-08-30

Peptides

Uncharacterized protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

Uncharacterized protein

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