SMTL ID : 6ape.2 (1 other biounit)

Crystal Structure of Bifunctional protein FolD from Helicobacter pylori

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.45 Å

Oligo State

homo-dimer

Ligands

4 x NA: SODIUM ION(Non-functional Binders)

NA.1: 1 residues within 4Å: Chain A: K.95 No protein-ligand interaction detected (PLIP) NA.2: 3 residues within 4Å: Chain A: E.167, I.168, K.169 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:I.168, A:K.169 Water bridges: A:A.193 NA.6: 1 residues within 4Å: Chain B: K.95 1 PLIP interactions: 1 interactions with chain B Water bridges: B:D.96 NA.7: 3 residues within 4Å: Chain B: E.167, I.168, K.169 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:I.168, B:K.169 Water bridges: B:A.193

6 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 6 residues within 4Å: Chain A: G.220, V.221, G.222, I.241, G.242, I.243 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.220, A:I.243, A:I.243 GOL.4: 2 residues within 4Å: Chain A: A.21, H.163 2 PLIP interactions: 2 interactions with chain A Water bridges: A:L.22, A:Y.164 GOL.5: 3 residues within 4Å: Chain A: K.65, D.132, T.278 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.65, A:D.132 GOL.8: 6 residues within 4Å: Chain B: G.220, V.221, G.222, I.241, G.242, I.243 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:G.220, B:I.243, B:I.243 GOL.9: 2 residues within 4Å: Chain B: A.21, H.163 1 PLIP interactions: 1 interactions with chain B Water bridges: B:L.22 GOL.10: 3 residues within 4Å: Chain B: K.65, D.132, T.278 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:K.65, B:D.132

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

SSGCID et al., Crystal Structure of Bifunctional protein FolD from Helicobacter pylori. to be published

Release Date

2017-09-13

Peptides

Bifunctional protein FolD: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Bifunctional protein FolD

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