SMTL ID : 6apl.3 (5 other biounits)

Crystal Structure of human ST6GALNAC2 in complex with CMP

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.35 Å

Oligo State

monomer

Ligands

1 x C5P: CYTIDINE-5'-MONOPHOSPHATE(Non-covalent)

C5P.1: 16 residues within 4Å: Chain A: G.155, N.156, G.157, L.178, N.179, G.180, S.304, T.305, G.306, A.307, G.324, F.325, I.326, D.335, H.336, L.345 14 PLIP interactions: 14 interactions with chain A Hydrogen bonds: A:N.156, A:N.156, A:N.179, A:G.180, A:S.304, A:S.304, A:T.305, A:G.306, A:A.307, A:I.326, A:D.335, A:D.335 Water bridges: A:G.158 Salt bridges: A:H.336

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2: 4 residues within 4Å: Chain A: N.85, S.87, I.88, R.286 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.85, A:R.286, A:R.286 NAG.3: 4 residues within 4Å: Chain A: N.161, G.162, E.339, R.340 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.161, A:R.340

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Moremen, K.W. et al., Expression system for structural and functional studies of human glycosylation enzymes. Nat. Chem. Biol. (2018)

Release Date

2017-12-20

Peptides

Alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

Alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2

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