SMTL ID : 6ar1.1 (1 other biounit)

Structure of a Thermostable Group II Intron Reverse Transcriptase with Template-Primer and Its Functional and Evolutionary Implications (RT/Duplex (Nat))

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.01 Å

Oligo State

monomer

Ligands

1 x DTP: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE(Non-covalent)

DTP.1: 16 residues within 4Å: Chain A: K.69, R.75, D.138, L.139, E.140, K.141, F.142, F.143, Q.191, D.223, N.255, K.258 Chain B: C.11 Chain C: U.3, G.4 Ligands: MG.3 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:F.143, A:Q.191 Hydrogen bonds: A:K.141, A:F.142, A:F.143, A:Q.191, A:N.255 Salt bridges: A:K.69, A:K.69, A:K.69, A:R.75, A:R.75, A:K.141, A:K.258, A:K.258

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 6 residues within 4Å: Chain A: R.343, R.347, H.394, L.397, G.398, K.399 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:H.394, A:K.399 Salt bridges: A:R.343, A:R.347, A:H.394

1 x MG: MAGNESIUM ION(Non-covalent)

MG.3: 4 residues within 4Å: Chain A: D.138, L.139, D.223 Ligands: DTP.1 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:D.138, A:L.139, A:D.223

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Stamos, J.L. et al., Structure of a Thermostable Group II Intron Reverse Transcriptase with Template-Primer and Its Functional and Evolutionary Implications. Mol. Cell (2017)

Release Date

2017-11-29

Peptides

GsI-IIC RT: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

GsI-IIC RT

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