SMTL ID : 6ax8.1

Mycobacterium tuberculosis methionyl-tRNA synthetase in complex with methionyl-adenylate

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

monomer

Ligands

1 x ME8: [[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methoxy-hydroxy-phosphoryl] (2S)-2-azanyl-4-methylsulfanyl-butanoate(Non-covalent)

ME8.1: 21 residues within 4Å: Chain A: A.9, I.10, A.11, Y.12, H.18, G.20, H.21, E.24, D.49, W.228, A.231, L.232, Y.235, G.261, D.263, I.264, H.268, H.290, G.291, F.292, L.293 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:W.228, A:I.264 Hydrogen bonds: A:Y.12, A:E.24, A:D.49, A:D.49, A:G.261, A:L.293, A:L.293 Salt bridges: A:H.21 pi-Stacking: A:F.292

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Barros-Alvarez, X. et al., The crystal structure of the drug target Mycobacterium tuberculosis methionyl-tRNA synthetase in complex with a catalytic intermediate. Acta Crystallogr F Struct Biol Commun (2018)

Release Date

2018-04-11

Peptides

Methionine-tRNA ligase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Methionine-tRNA ligase