SMTL ID : 6ay2.1 (1 other biounit)

Structure of CathB with covalently linked Compound 28

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

1 x C1G: N~1~-[(2S)-1-amino-5-(carbamoylamino)pentan-2-yl]-N'~1~-[(1R)-1-(thiophen-3-yl)ethyl]cyclobutane-1,1-dicarboxamide(Covalent)

C1G.1: 12 residues within 4Å: Chain A: Q.24, G.28, C.30, W.31, G.69, G.74, G.75, P.77, E.123, G.199, H.200, A.201 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:A.201 Hydrogen bonds: A:Q.24, A:G.28, A:C.30, A:W.31, A:G.75, A:G.75, A:E.123, A:E.123, A:G.199

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wei, B. et al., Discovery of Peptidomimetic Antibody-Drug Conjugate Linkers with Enhanced Protease Specificity. J. Med. Chem. (2018)

Release Date

2017-12-27

Peptides

Cathepsin B: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cathepsin B

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