SMTL ID : 6ayf.1

TRPML3/ML-SA1 complex at pH 7.4

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-tetramer

Ligands

8 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 2 residues within 4Å: Chain A: Y.142, N.143 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:Y.142 Hydrogen bonds: A:N.143 NAG.2: 1 residues within 4Å: Chain A: N.177 No protein-ligand interaction detected (PLIP) NAG.3: 2 residues within 4Å: Chain B: Y.142, N.143 2 PLIP interactions: 2 interactions with chain B Hydrophobic interactions: B:Y.142 Hydrogen bonds: B:N.143 NAG.4: 1 residues within 4Å: Chain B: N.177 No protein-ligand interaction detected (PLIP) NAG.5: 2 residues within 4Å: Chain C: Y.142, N.143 2 PLIP interactions: 2 interactions with chain C Hydrophobic interactions: C:Y.142 Hydrogen bonds: C:N.143 NAG.6: 1 residues within 4Å: Chain C: N.177 No protein-ligand interaction detected (PLIP) NAG.7: 2 residues within 4Å: Chain D: Y.142, N.143 2 PLIP interactions: 2 interactions with chain D Hydrophobic interactions: D:Y.142 Hydrogen bonds: D:N.143 NAG.8: 1 residues within 4Å: Chain D: N.177 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhou, X. et al., Cryo-EM structures of the human endolysosomal TRPML3 channel in three distinct states. Nat. Struct. Mol. Biol. (2017)

Release Date

2017-11-08

Peptides

Mucolipin-3: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Membrane

We predict this structure to be a membrane protein.
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Mucolipin-3

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