SMTL ID : 6b7h.1

Structure of mGluR3 with an agonist

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.82 Å

Oligo State

monomer

Ligands

2 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 3 residues within 4Å: Chain A: F.209, F.210, N.211 No protein-ligand interaction detected (PLIP) NAG-NAG.2: 1 residues within 4Å: Chain A: N.240 No protein-ligand interaction detected (PLIP)

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.3: 2 residues within 4Å: Chain A: P.415, N.416 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:P.415

1 x CWY: (1S,2S,4S,5R,6S)-2-amino-4-[(3-methoxybenzene-1-carbonyl)amino]bicyclo[3.1.0]hexane-2,6-dicarboxylic acid(Non-covalent)

CWY.4: 16 residues within 4Å: Chain A: R.66, R.70, S.102, S.151, Y.152, S.153, A.174, S.175, T.176, Y.224, R.279, S.280, D.281, D.303, G.304, K.391 17 PLIP interactions: 17 interactions with chain A Hydrophobic interactions: A:Y.152, A:Y.152, A:Y.224, A:R.279, A:R.279 Hydrogen bonds: A:R.66, A:S.153, A:A.174, A:T.176, A:R.279, A:S.280, A:D.303, A:D.303 Salt bridges: A:R.66, A:R.70, A:K.391 pi-Stacking: A:Y.152

1 x CA: CALCIUM ION(Non-covalent)

CA.5: 7 residues within 4Å: Chain A: I.81, N.82, D.84, L.87, L.88, P.89, V.91 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:I.81, A:L.88

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Monn, J.A. et al., Synthesis and Pharmacological Characterization of C4beta-Amide-Substituted 2-Aminobicyclo[3.1.0]hexane-2,6-dicarboxylates. Identification of (1 S,2 S,4 S,5 R,6 S)-2-Amino-4-[(3-methoxybenzoyl)amino]bicyclo[3.1.0]hexane-2,6-dicarboxylic Acid (LY2794193), a Highly Potent and Selective mGlu3Receptor Agonist. J. Med. Chem. (2018)

Release Date

2018-04-25

Peptides

Metabotropic glutamate receptor 3: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Metabotropic glutamate receptor 3

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