SMTL ID : 6b8s.1 (1 other biounit)

Crystal Structure of Dihydroorotate Dehydrogenase from Helicobacter pylori with bound FMN

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.25 Å

Oligo State

monomer

Ligands

1 x FMN: FLAVIN MONONUCLEOTIDE(Non-covalent)

FMN.1: 24 residues within 4Å: Chain A: A.74, A.75, G.76, K.79, G.98, T.99, L.113, N.124, M.126, N.153, N.186, K.222, T.250, N.251, T.252, S.269, G.270, L.273, V.297, G.298, G.299, I.319, Y.320, S.321 21 PLIP interactions: 21 interactions with chain A Hydrophobic interactions: A:L.113, A:N.124, A:Y.320, A:Y.320 Hydrogen bonds: A:A.75, A:K.79, A:T.99, A:T.99, A:N.153, A:N.186, A:K.222, A:K.222, A:N.251, A:G.270, A:G.299, A:Y.320, A:S.321 Water bridges: A:G.298, A:G.298, A:I.300, A:A.322

1 x PGE: TRIETHYLENE GLYCOL(Non-functional Binders)

PGE.2: 6 residues within 4Å: Chain A: Y.11, H.27, V.30, F.77, F.323, I.324 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Y.11, A:H.27 Water bridges: A:A.23, A:H.27

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dranow, D.M. et al., Crystal Structure of Dihydroorotate Dehydrogenase from Helicobacter pylori with bound FMN. to be published

Release Date

2017-11-22

Peptides

Dihydroorotate dehydrogenase (quinone): A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Dihydroorotate dehydrogenase (quinone)

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