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SMTL ID : 6b8x.1

Multiconformer model of apo WT PTP1B with glycerol at 278 K

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.74 Å

Oligo State

monomer

Ligands

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.1:	9 residues within 4Å: Chain A: Y.46, D.48, V.49, F.182, S.216, A.217, I.219, Q.262 Ligands: GOL.4 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:D.48, A:Q.262 Water bridges: A:D.181, A:A.217
GOL.2:	8 residues within 4Å: Chain A: S.146, E.147, D.148, V.155, R.156, Q.157, L.172 Ligands: GOL.3 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.146, A:D.148, A:Q.157
GOL.3:	7 residues within 4Å: Chain A: R.105, V.155, L.172, F.174, K.197, S.201 Ligands: GOL.2 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.105, A:R.105 Water bridges: A:K.197
GOL.4:	7 residues within 4Å: Chain A: D.48, V.49, I.219, M.258, G.259, Q.262 Ligands: GOL.1 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.48 Water bridges: A:R.24

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Keedy, D.A. et al., An expanded allosteric network in PTP1B by multitemperature crystallography, fragment screening, and covalent tethering. Elife (2018)

Release Date

2018-06-20

Peptides

Tyrosine-protein phosphatase non-receptor type 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

Tyrosine-protein phosphatase non-receptor type 1

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Background

Transparent

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