SMTL ID : 6b9g.3 (3 other biounits)

human ATL1 GTPase domain bound to GDP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

monomer

Ligands

1 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)

GDP.1: 17 residues within 4Å: Chain A: F.77, R.78, K.79, G.80, K.81, S.82, F.83, Q.149, R.218, D.219, H.272, P.273, V.277, A.278, N.280, P.281 Ligands: MG.2 16 PLIP interactions: 16 interactions with chain A Hydrogen bonds: A:R.78, A:K.79, A:G.80, A:K.81, A:S.82, A:S.82, A:F.83, A:Q.149, A:R.218, A:H.272, A:N.280 Water bridges: A:N.282, A:N.282 Salt bridges: A:K.81, A:D.219 pi-Cation interactions: A:H.272

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 5 residues within 4Å: Chain A: S.82, Q.125, D.147, Q.149 Ligands: GDP.1 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:S.82

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

O'Donnell, J.P. et al., A hereditary spastic paraplegia-associated atlastin variant exhibits defective allosteric coupling in the catalytic core. J. Biol. Chem. (2018)

Release Date

2017-12-06

Peptides

Atlastin-1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

Atlastin-1

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