SMTL ID : 6b9l.1

Crystal structure of EphA2 with peptide 135E2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.20 Å

Oligo State

hetero-4-4-mer

Ligands

1 x ALA- HIS- HIS- HIS- HIS- ALA: HIS TAG CLEAVED OFF(Non-covalent)

ALA-HIS-HIS-HIS-HIS-ALA.1: 9 residues within 4Å: Chain A: R.88, Y.118, T.135, K.136, I.137, R.163, S.164, V.165, G.166 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:V.165 Hydrogen bonds: A:R.88, A:Y.118, A:Y.118, A:S.164, A:S.164, A:G.166

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gambini, L. et al., Structure-Based Design of Novel EphA2 Agonistic Agents with Nanomolar Affinity in Vitro and in Cell. ACS Chem. Biol. (2018)

Release Date

2018-10-17

Peptides

Ephrin type-A receptor 2: ABCD
peptide 135E2, (DUG)SAYPDSVPFR: EFGH

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

G
G

H
H

Ephrin type-A receptor 2

peptide 135E2, (DUG)SAYPDSVPFR