SMTL ID : 6bat.1

Crystal Structure of Wild-Type GltPh in complex with L-aspartate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.40 Å

Oligo State

homo-trimer

Ligands

6 x NA: SODIUM ION(Non-functional Binders)

NA.1: 7 residues within 4Å: Chain A: S.278, G.306, A.307, N.310, M.311, N.401, D.405 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.278, A:D.405 NA.2: 5 residues within 4Å: Chain A: T.308, M.311, S.349, I.350, T.352 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:I.350 NA.4: 7 residues within 4Å: Chain B: S.278, G.306, A.307, N.310, M.311, N.401, D.405 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:S.278, B:S.278 NA.5: 5 residues within 4Å: Chain B: T.308, M.311, S.349, I.350, T.352 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:I.350 NA.7: 7 residues within 4Å: Chain C: S.278, G.306, A.307, N.310, M.311, N.401, D.405 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:S.278, C:G.306 NA.8: 5 residues within 4Å: Chain C: T.308, M.311, S.349, I.350, T.352 1 PLIP interactions: 1 interactions with chain C Hydrogen bonds: C:T.308

3 x ASP: ASPARTIC ACID(Non-covalent)

ASP.3: 17 residues within 4Å: Chain A: R.276, S.277, S.278, M.311, T.314, T.352, A.353, G.354, V.355, P.356, G.357, A.358, G.359, D.394, R.397, T.398, N.401 10 PLIP interactions: 9 interactions with chain A, 1 Ligand-Ligand interactions Hydrogen bonds: A:R.276, A:S.278, A:A.353, A:G.357, A:A.358, A:G.359, A:D.394, A:N.401, D.3 Salt bridges: A:R.397 ASP.6: 16 residues within 4Å: Chain B: R.276, S.277, S.278, M.311, T.314, T.352, A.353, G.354, V.355, P.356, A.358, G.359, D.394, R.397, T.398, N.401 6 PLIP interactions: 6 interactions with chain B Hydrogen bonds: B:S.278, B:V.355, B:A.358, B:D.394, B:N.401 Salt bridges: B:R.397 ASP.9: 16 residues within 4Å: Chain C: R.276, S.277, S.278, M.311, T.314, T.352, G.354, V.355, P.356, G.357, A.358, G.359, D.394, R.397, T.398, N.401 8 PLIP interactions: 6 interactions with chain C, 2 Ligand-Ligand interactions Hydrogen bonds: C:S.278, C:A.358, C:G.359, C:D.394, C:N.401, D.9, D.9 Salt bridges: C:R.397

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Scopelliti, A.J. et al., Structural characterisation reveals insights into substrate recognition by the glutamine transporter ASCT2/SLC1A5. Nat Commun (2018)

Release Date

2018-01-17

Peptides

Glutamate transporter homolog: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Membrane

We predict this structure to be a membrane protein.
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Glutamate transporter homolog