SMTL ID : 6bca.1 (1 other biounit)

A Complex between PH Domain of LbcRhoGEF (AKAP-Lbc) and Activated RhoA Bound to a GTP Analog

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

hetero-1-1-mer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 3 residues within 4Å: Chain A: T.23, T.41 Ligands: GSP.2 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:T.23, A:T.41, H2O.2, H2O.3

1 x GSP: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE(Non-covalent)

GSP.2: 23 residues within 4Å: Chain A: D.17, G.18, A.19, C.20, G.21, K.22, T.23, C.24, F.34, Y.38, V.39, P.40, T.41, A.65, G.66, Q.67, K.122, D.124, L.125, S.164, A.165, K.166 Ligands: MG.1 21 PLIP interactions: 21 interactions with chain A Hydrogen bonds: A:D.17, A:A.19, A:C.20, A:G.21, A:K.22, A:K.22, A:T.23, A:C.24, A:Y.38, A:T.41, A:G.66, A:K.122, A:K.122, A:A.165, A:K.166 Water bridges: A:T.23, A:V.39, A:Q.67 Salt bridges: A:K.22, A:D.124 pi-Stacking: A:F.34

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chen, Z. et al., Crystal structures of the PH domains from Lbc family of RhoGEFs bound to activated RhoA GTPase. Data Brief (2018)

Release Date

2017-12-13

Peptides

Transforming protein RhoA: A
A-kinase anchor protein 13: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
F

B
B

Transforming protein RhoA

A-kinase anchor protein 13

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