SMTL ID : 6bcm.1

Structure of a Self-inhibited N475A variant of the Venezuelan Equine Encephalitis Virus (VEEV) nsP2 cysteine protease

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 5 residues within 4Å: Chain A: L.152, H.154, A.155, L.156 Ligands: GOL.2 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:L.156, A:L.156 GOL.2: 4 residues within 4Å: Chain A: R.150, R.151, L.152 Ligands: GOL.1 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.150, A:L.152

1 x NA: SODIUM ION(Non-functional Binders)

NA.3: 6 residues within 4Å: Chain A: R.284, Q.285, D.311, R.312, K.313, R.315 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.311, A:R.315

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Compton, J.R. et al., Mutation of Asn-475 in the Venezuelan Equine Encephalitis Virus nsP2 Cysteine Protease Leads to a Self-Inhibited State. Biochemistry (2017)

Release Date

2017-11-08

Peptides

Protease nsP2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Protease nsP2