- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.00 Å
- Oligo State
- homo-trimer
- Ligands
- 1 x RPT: RIFAPENTINE(Non-covalent)
- 8 x FMT: FORMIC ACID(Non-functional Binders)
FMT.2: 6 residues within 4Å:- Chain A: P.90, Y.275, Y.285, D.427, I.430, F.435
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:Y.275, A:Y.285
FMT.3: 3 residues within 4Å:- Chain A: K.471
- Chain C: N.123, N.124
1 PLIP interactions:1 interactions with chain C- Hydrogen bonds: C:N.123
FMT.4: 6 residues within 4Å:- Chain A: Y.455, L.479, T.480, F.481
- Chain C: Q.37, Y.38
2 PLIP interactions:1 interactions with chain C, 1 interactions with chain A- Hydrogen bonds: C:Y.38, A:T.480
FMT.5: 6 residues within 4Å:- Chain A: W.402, T.403, S.404, N.407, Y.409, N.410
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:N.410
FMT.6: 6 residues within 4Å:- Chain A: P.36, Q.37, Y.38
- Chain B: Y.455, L.479, T.480
3 PLIP interactions:2 interactions with chain B, 1 interactions with chain A- Hydrogen bonds: B:T.480, B:T.480, A:Y.38
FMT.9: 5 residues within 4Å:- Chain B: Q.37, Y.38
- Chain C: Y.455, L.479, T.480
2 PLIP interactions:1 interactions with chain B, 1 interactions with chain C- Hydrogen bonds: B:Y.38, C:T.480
FMT.11: 5 residues within 4Å:- Chain C: I.360, Y.361, N.362, K.365, K.366
1 PLIP interactions:1 interactions with chain C- Hydrogen bonds: C:N.362
FMT.12: 5 residues within 4Å:- Chain C: Y.275, Y.285, I.425, D.427, F.435
1 PLIP interactions:1 interactions with chain C- Hydrogen bonds: C:Y.285
- 4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.7: 8 residues within 4Å:- Chain A: Y.361, N.391, I.393, D.394, I.397, H.518, P.519, I.520
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:Y.361, A:N.391, A:H.518, A:I.520
EDO.8: 3 residues within 4Å:- Chain A: V.166, E.167, D.168
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:D.168
EDO.10: 8 residues within 4Å:- Chain B: Y.361, N.391, I.393, D.394, I.397, H.518, P.519, I.520
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:Y.361, B:N.391, B:H.518, B:I.520
EDO.13: 7 residues within 4Å:- Chain C: Y.361, N.391, I.393, I.397, H.518, P.519, I.520
3 PLIP interactions:3 interactions with chain C- Hydrogen bonds: C:N.391, C:H.518, C:I.520
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Garriga, D. et al., Structural basis for the inhibition of poxvirus assembly by the antibiotic rifampicin. Proc. Natl. Acad. Sci. U.S.A. (2018)
- Release Date
- 2018-07-18
- Peptides
- Scaffold protein D13: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
C
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.00 Å
- Oligo State
- homo-trimer
- Ligands
- 1 x RPT: RIFAPENTINE(Non-covalent)
- 8 x FMT: FORMIC ACID(Non-functional Binders)
- 4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Garriga, D. et al., Structural basis for the inhibition of poxvirus assembly by the antibiotic rifampicin. Proc. Natl. Acad. Sci. U.S.A. (2018)
- Release Date
- 2018-07-18
- Peptides
- Scaffold protein D13: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
C