SMTL ID : 6bh8.1 (1 other biounit)

Crystal structure of ZMPSTE24 in complex with phosphoramidon

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.85 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: H.335, H.339, E.415 Ligands: RDF.2 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Ligand interactions Metal complexes: A:H.335, A:H.339, A:E.415, RDF.2, RDF.2

1 x RDF: N-ALPHA-L-RHAMNOPYRANOSYLOXY(HYDROXYPHOSPHINYL)-L-LEUCYL-L-TRYPTOPHAN(Non-covalent)

RDF.2: 15 residues within 4Å: Chain A: S.264, N.265, V.332, H.335, E.336, H.339, E.415, L.431, L.435, L.438, N.442, S.458, H.459, R.465 Ligands: ZN.1 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:V.332, A:V.332, A:L.431, A:L.435, A:L.438, A:N.442 Hydrogen bonds: A:S.264, A:N.265, A:N.265, A:R.465, A:R.465 Salt bridges: A:H.459

1 x C8E: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE(Non-functional Binders)

C8E.3: 4 residues within 4Å: Chain A: L.25, W.28, Y.31, L.32 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:W.28, A:L.32

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Goblirsch, B.R. et al., Phosphoramidon inhibits the integral membrane protein zinc metalloprotease ZMPSTE24. Acta Crystallogr D Struct Biol (2018)

Release Date

2018-08-15

Peptides

CAAX prenyl protease 1 homolog: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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CAAX prenyl protease 1 homolog

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