SMTL ID : 6bk3.1

Crystal structure of Os79 from O. sativa in complex with UDP and deoxynivalenol-3-glucoside (glucose moitey not resolved)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.17 Å

Oligo State

monomer

Ligands

1 x UDP: URIDINE-5'-DIPHOSPHATE(Non-covalent)

UDP.1: 10 residues within 4Å: Chain A: V.318, F.344, C.345, Q.347, H.362, G.364, W.365, N.366, S.367, E.370 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:F.344 Hydrogen bonds: A:C.345, A:C.345, A:Q.347, A:G.364, A:N.366, A:N.366, A:S.367, A:S.367, A:E.370 Water bridges: A:Q.347, A:L.348, A:L.348, A:W.365, A:W.365 Salt bridges: A:H.362

1 x B2S: (3alpha,7alpha)-3,7,15-trihydroxy-12,13-epoxytrichothec-9-en-8-one(Non-covalent)

B2S.2: 8 residues within 4Å: Chain A: F.22, M.80, L.90, H.123, F.190, F.200, Q.203, W.384 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:F.22 Hydrogen bonds: A:Q.203, A:Q.203

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wetterhorn, K.M. et al., Determinants and Expansion of Specificity in a Trichothecene UDP-Glucosyltransferase from Oryza sativa. Biochemistry (2017)

Release Date

2017-11-29

Peptides

UDP-glycosyltransferase 79: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

UDP-glycosyltransferase 79

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