SMTL ID : 6bl8.2 (1 other biounit)

Predicting the Conformational Variability of Abl Tyrosine Kinase Using Molecular Dynamics Simulations and Markov State Models

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

1 x PVB: PURVALANOL B(Non-covalent)

PVB.1: 16 residues within 4Å: Chain A: L.16, G.17, V.24, A.37, V.67, T.83, E.84, F.85, M.86, T.87, Y.88, G.89, N.90, R.135, L.138, F.150 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:L.16, A:V.24, A:A.37, A:F.85, A:L.138 Hydrogen bonds: A:M.86, A:R.135

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 4 residues within 4Å: Chain A: R.130, F.161, A.163, H.164 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:R.130, A:H.164 SO4.3: 3 residues within 4Å: Chain A: R.228, E.230, G.231 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.231, A:C.232 Salt bridges: A:R.228

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Meng, Y. et al., Predicting the Conformational Variability of Abl Tyrosine Kinase using Molecular Dynamics Simulations and Markov State Models. J Chem Theory Comput (2018)

Release Date

2018-03-07

Peptides

Tyrosine-protein kinase ABL1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Tyrosine-protein kinase ABL1

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