SMTL ID : 6bn1.2 (1 other biounit)

Salvador Hippo SARAH domain complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

hetero-2-2-mer

Ligands

8 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)

MPD.1: 2 residues within 4Å: Chain A: R.17, E.24 3 PLIP interactions: 2 interactions with chain A, 1 interactions with chain C Hydrogen bonds: A:R.17, A:R.17 Water bridges: C:M.27 MPD.2: 4 residues within 4Å: Chain A: N.33, Y.36, N.37, R.40 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:Y.36 Hydrogen bonds: A:N.33, A:R.40 MPD.3: 4 residues within 4Å: Chain A: N.37, R.40, Q.41, V.44 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:R.40, A:V.44 MPD.4: 2 residues within 4Å: Chain B: R.17, E.24 3 PLIP interactions: 1 interactions with chain D, 2 interactions with chain B Water bridges: D:M.27 Hydrogen bonds: B:R.17, B:R.17 MPD.5: 4 residues within 4Å: Chain B: N.33, Y.36, N.37, R.40 3 PLIP interactions: 3 interactions with chain B Hydrophobic interactions: B:Y.36 Hydrogen bonds: B:N.33, B:R.40 MPD.6: 4 residues within 4Å: Chain B: N.37, R.40, Q.41, V.44 2 PLIP interactions: 2 interactions with chain B Hydrophobic interactions: B:R.40, B:V.44 MPD.8: 4 residues within 4Å: Chain A: F.5, F.8 Chain C: L.23, Q.24 4 PLIP interactions: 2 interactions with chain C, 2 interactions with chain A Hydrophobic interactions: C:L.23, A:F.8, A:F.8 Hydrogen bonds: C:Q.24 MPD.10: 4 residues within 4Å: Chain B: F.5, F.8 Chain D: L.23, Q.24 4 PLIP interactions: 2 interactions with chain D, 2 interactions with chain B Hydrophobic interactions: D:L.23, B:F.8, B:F.8 Hydrogen bonds: D:Q.24

2 x NI: NICKEL (II) ION(Non-covalent)

NI.7: 3 residues within 4Å: Chain A: D.12 Chain B: H.23 Chain C: L.1 3 PLIP interactions: 1 interactions with chain B, 1 interactions with chain A, 1 interactions with chain C Metal complexes: B:H.23, A:D.12, C:L.1 NI.9: 3 residues within 4Å: Chain A: H.23 Chain B: D.12 Chain D: L.1 3 PLIP interactions: 1 interactions with chain A, 1 interactions with chain B, 1 interactions with chain D Metal complexes: A:H.23, B:D.12, D:L.1

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cairns, L. et al., Salvador has an extended SARAH domain that mediates binding to Hippo kinase. J. Biol. Chem. (2018)

Release Date

2018-03-14

Peptides

Serine/threonine-protein kinase hippo: AB
Scaffold protein salvador: CD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
B

D
B

Serine/threonine-protein kinase hippo

Scaffold protein salvador

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