SMTL ID : 6bol.1

Crystal structure of mutant 2-methylcitrate synthase mcsAG419A from Aspergillus fumigatus.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

homo-dimer

Ligands

3 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 4 residues within 4Å: Chain A: G.165, L.166, S.167 Chain B: R.320 3 PLIP interactions: 2 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:L.166, A:L.166 Salt bridges: B:R.320 PO4.4: 3 residues within 4Å: Chain B: K.30, E.31, S.33 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:K.30, B:S.33 Salt bridges: B:K.30 PO4.5: 5 residues within 4Å: Chain A: R.430 Chain B: H.245, N.249, H.281, H.327 5 PLIP interactions: 2 interactions with chain B, 3 interactions with chain A Salt bridges: B:H.245, B:H.327, A:R.430 Water bridges: A:R.430, A:R.430

2 x OAA: OXALOACETATE ION(Non-covalent)

OAA.2: 6 residues within 4Å: Chain A: L.437 Chain B: K.22, L.25, E.58, H.71, G.103 7 PLIP interactions: 5 interactions with chain B, 2 interactions with chain A Water bridges: B:E.58, B:E.58, A:N.435 Salt bridges: B:K.22, B:K.22, B:H.71 Hydrophobic interactions: A:L.437 OAA.3: 5 residues within 4Å: Chain B: R.23, K.168, A.169, A.423, G.425 2 PLIP interactions: 2 interactions with chain B Water bridges: B:R.23 Salt bridges: B:R.23

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.6: 3 residues within 4Å: Chain B: D.10, L.11, F.114 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Schlachter, C.R. et al., Comparative studies of Aspergillus fumigatus 2-methylcitrate synthase and human citrate synthase. Biol.Chem. (2019)

Release Date

2018-11-28

Peptides

2-methylcitrate synthase, mitochondrial: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
A

2-methylcitrate synthase, mitochondrial