SMTL ID : 6bph.1

Crystal structure of the chromodomain of RBBP1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

homo-dimer

Ligands

34 x UNX: UNKNOWN ATOM OR ION(Non-functional Binders)

UNX.1: 3 residues within 4Å: Chain A: W.49, N.50, Y.53 Ligand excluded by PLIP UNX.2: 5 residues within 4Å: Chain A: C.7, L.8 Chain B: C.7, L.8 Ligands: UNX.19 Ligand excluded by PLIP UNX.3: 2 residues within 4Å: Chain A: K.12, E.27 Ligand excluded by PLIP UNX.4: 3 residues within 4Å: Chain A: E.39, V.40, A.59 Ligand excluded by PLIP UNX.5: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP UNX.6: 3 residues within 4Å: Chain A: V.57, K.58, R.61 Ligand excluded by PLIP UNX.7: 3 residues within 4Å: Chain A: Y.17, G.18, R.61 Ligand excluded by PLIP UNX.8: 4 residues within 4Å: Chain A: K.14, I.63, W.64, P.65 Ligand excluded by PLIP UNX.9: 2 residues within 4Å: Chain A: D.36, D.37 Ligand excluded by PLIP UNX.10: 3 residues within 4Å: Chain A: G.10, S.29, Y.47 Ligand excluded by PLIP UNX.11: 6 residues within 4Å: Chain A: H.45, Y.46, W.49, N.50, Y.53, D.54 Ligand excluded by PLIP UNX.12: 2 residues within 4Å: Chain A: D.37, E.39 Ligand excluded by PLIP UNX.13: 2 residues within 4Å: Chain A: P.65, L.66 Ligand excluded by PLIP UNX.14: 2 residues within 4Å: Chain A: A.59, W.64 Ligand excluded by PLIP UNX.15: 2 residues within 4Å: Chain A: N.50, V.51 Ligand excluded by PLIP UNX.16: 5 residues within 4Å: Chain A: S.32, T.33, E.34, W.56 Chain B: K.68 Ligand excluded by PLIP UNX.17: 1 residues within 4Å: Chain A: G.48 Ligand excluded by PLIP UNX.18: 3 residues within 4Å: Chain B: W.49, N.50, Y.53 Ligand excluded by PLIP UNX.19: 5 residues within 4Å: Chain A: C.7, L.8 Chain B: C.7, L.8 Ligands: UNX.2 Ligand excluded by PLIP UNX.20: 2 residues within 4Å: Chain B: K.12, E.27 Ligand excluded by PLIP UNX.21: 3 residues within 4Å: Chain B: E.39, V.40, A.59 Ligand excluded by PLIP UNX.22: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP UNX.23: 3 residues within 4Å: Chain B: V.57, K.58, R.61 Ligand excluded by PLIP UNX.24: 3 residues within 4Å: Chain B: Y.17, G.18, R.61 Ligand excluded by PLIP UNX.25: 4 residues within 4Å: Chain B: K.14, I.63, W.64, P.65 Ligand excluded by PLIP UNX.26: 2 residues within 4Å: Chain B: D.36, D.37 Ligand excluded by PLIP UNX.27: 3 residues within 4Å: Chain B: G.10, S.29, Y.47 Ligand excluded by PLIP UNX.28: 6 residues within 4Å: Chain B: H.45, Y.46, W.49, N.50, Y.53, D.54 Ligand excluded by PLIP UNX.29: 2 residues within 4Å: Chain B: D.37, E.39 Ligand excluded by PLIP UNX.30: 2 residues within 4Å: Chain B: P.65, L.66 Ligand excluded by PLIP UNX.31: 2 residues within 4Å: Chain B: A.59, W.64 Ligand excluded by PLIP UNX.32: 2 residues within 4Å: Chain B: N.50, V.51 Ligand excluded by PLIP UNX.33: 5 residues within 4Å: Chain A: K.68 Chain B: S.32, T.33, E.34, W.56 Ligand excluded by PLIP UNX.34: 1 residues within 4Å: Chain B: G.48 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lei, M. et al., Crystal structure of chromo barrel domain of RBBP1. Biochem. Biophys. Res. Commun. (2018)

Release Date

2017-12-20

Peptides

AT-rich interactive domain-containing protein 4A: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

AT-rich interactive domain-containing protein 4A