SMTL ID : 6bqb.1

MGG4 Fab in complex with peptide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.77 Å

Oligo State

hetero-1-1-1-mer

Ligands

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 8 residues within 4Å: Chain A: T.170, E.171, Q.172, D.173, S.174 Chain B: V.171, H.172, T.173 6 PLIP interactions: 3 interactions with chain B, 3 interactions with chain A Water bridges: B:V.171, B:T.173, B:T.173 Hydrogen bonds: A:E.171, A:D.173, A:D.173 GOL.2: 9 residues within 4Å: Chain A: Q.43, K.45, K.51, L.53, V.64, P.65, R.67, F.68, D.88 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Q.43, A:Q.43 Water bridges: A:K.51, A:L.52, A:G.63 GOL.3: 5 residues within 4Å: Chain A: Q.166, T.186 Chain B: K.151, Q.179, S.180 8 PLIP interactions: 6 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:K.151, B:Q.179, B:S.180, B:S.180, B:S.180, A:Q.166, A:T.186 Water bridges: B:S.181

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tan, J. et al., A public antibody lineage that potently inhibits malaria infection through dual binding to the circumsporozoite protein. Nat. Med. (2018)

Release Date

2018-03-07

Peptides

MGG4 Fab light chain: A
MGG4 Fab heavy chain: B
N-terminal junction peptide: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
L

B
H

C
P

MGG4 Fab light chain

MGG4 Fab heavy chain

N-terminal junction peptide

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