SMTL ID : 6bt2.2 (1 other biounit)

Structure of the human Nocturnin catalytic domain with bound sulfate anion

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.41 Å

Oligo State

monomer

Ligands

2 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 1 residues within 4Å: Chain A: E.77 6 PLIP interactions: 1 interactions with chain A, 5 Ligand-Water interactions Metal complexes: A:E.77, H2O.2, H2O.2, H2O.2, H2O.3, H2O.5 MG.2: 3 residues within 4Å: Chain A: D.206, N.208, H.296 No protein-ligand interaction detected (PLIP)

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 6 residues within 4Å: Chain A: K.101, P.105, N.145, Q.146, K.170, A.171 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:N.145, A:Q.146, A:A.171 Water bridges: A:K.101 Salt bridges: A:K.101, A:K.170

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

T Abshire, E. et al., The structure of human Nocturnin reveals a conserved ribonuclease domain that represses target transcript translation and abundance in cells. Nucleic Acids Res. (2018)

Release Date

2018-05-16

Peptides

Nocturnin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Nocturnin

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