SMTL ID : 6bt5.1

Human mGlu8 Receptor complexed with L-AP4

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.92 Å

Oligo State

homo-dimer

Ligands

2 x E7P: (2S)-2-amino-4-phosphonobutanoic acid(Non-covalent)

E7P.1: 13 residues within 4Å: Chain A: K.35, R.39, A.118, A.119, S.120, A.141, S.142, T.143, Y.191, D.273, S.274, K.278, K.365 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:A.141 Hydrogen bonds: A:R.39, A:R.39, A:S.120, A:A.141, A:T.143, A:D.273, A:K.278, A:K.278, A:K.365 Water bridges: A:K.35 E7P.3: 13 residues within 4Å: Chain B: K.35, R.39, A.118, A.119, S.120, A.141, S.142, T.143, Y.191, D.273, S.274, K.278, K.365 10 PLIP interactions: 10 interactions with chain B Hydrophobic interactions: B:A.141 Hydrogen bonds: B:K.35, B:R.39, B:R.39, B:S.120, B:T.143, B:D.273, B:K.278, B:K.365 Water bridges: B:K.35

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2: 2 residues within 4Å: Chain A: N.59, I.392 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.59 NAG.4: 1 residues within 4Å: Chain B: N.59 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:N.59

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Schkeryantz, J.M. et al., Determination of L-AP4-bound human mGlu8 receptor amino terminal domain structure and the molecular basis for L-AP4's group III mGlu receptor functional potency and selectivity. Bioorg. Med. Chem. Lett. (2018)

Release Date

2018-02-07

Peptides

Metabotropic glutamate receptor 8: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Metabotropic glutamate receptor 8