SMTL ID : 6bw4.2 (1 other biounit)

Crystal structure of RBBP4 in complex with PRDM16 N-terminal peptide

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

hetero-1-1-mer

Ligands

12 x UNX: UNKNOWN ATOM OR ION(Non-functional Binders)

UNX.1: 1 residues within 4Å: Ligands: UNX.2 No protein-ligand interaction detected (PLIP) UNX.2: 2 residues within 4Å: Chain A: V.37 Ligands: UNX.1 No protein-ligand interaction detected (PLIP) UNX.3: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) UNX.4: 2 residues within 4Å: Chain A: A.230 Ligands: UNX.6 No protein-ligand interaction detected (PLIP) UNX.5: 2 residues within 4Å: Chain A: H.202, T.229 No protein-ligand interaction detected (PLIP) UNX.6: 4 residues within 4Å: Chain A: A.230, V.231 Ligands: UNX.4, UNX.11 No protein-ligand interaction detected (PLIP) UNX.7: 1 residues within 4Å: Chain A: T.226 No protein-ligand interaction detected (PLIP) UNX.8: 1 residues within 4Å: Ligands: UNX.9 No protein-ligand interaction detected (PLIP) UNX.9: 2 residues within 4Å: Chain A: N.90 Ligands: UNX.8 No protein-ligand interaction detected (PLIP) UNX.10: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) UNX.11: 3 residues within 4Å: Chain A: H.202, V.231 Ligands: UNX.6 No protein-ligand interaction detected (PLIP) UNX.12: 3 residues within 4Å: Chain A: H.241, E.242, S.243 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ivanochko, D. et al., Direct interaction between the PRDM3 and PRDM16 tumor suppressors and the NuRD chromatin remodeling complex. Nucleic Acids Res. (2019)

Release Date

2017-12-27

Peptides

Histone-binding protein RBBP4: A
PR domain zinc finger protein 16: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
D

Histone-binding protein RBBP4

PR domain zinc finger protein 16

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