SMTL ID : 6c2x.1

Crystal structure of Mycobacterium tuberculosis malate synthase in complex with 2-Br-6-Me-phenyldiketoacid

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

monomer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 5 residues within 4Å: Chain A: D.274, K.399, E.434, D.462 Ligands: EHV.2 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.434, A:D.462, H2O.1, H2O.1

1 x EHV: (2S)-4-(2-bromo-6-methylphenyl)-2-hydroxy-4-oxobutanoic acid(Non-covalent)

EHV.2: 16 residues within 4Å: Chain A: V.118, D.274, R.339, M.432, E.434, G.459, F.460, L.461, D.462, M.515, T.517, W.541, M.631, D.633, A.635 Ligands: MG.1 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:L.461, A:T.517, A:W.541, A:A.635 Hydrogen bonds: A:D.274, A:R.339, A:R.339, A:E.434, A:L.461, A:D.462 Water bridges: A:T.458, A:M.515

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ellenbarger, J.F. et al., Anion-pi Interactions in Computer-Aided Drug Design: Modeling the Inhibition of Malate Synthase by Phenyl-Diketo Acids. J Chem Inf Model (2018)

Release Date

2018-09-05

Peptides

Malate synthase G: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Malate synthase G

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