SMTL ID : 6c5t.1

PPARg LBD bound to SR11023

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.75 Å

Oligo State

monomer

Ligands

1 x EKP: 2-{4-[(5-{[(1R)-1-(3-cyclopropylphenyl)ethyl]carbamoyl}-2,3-dimethyl-1H-indol-1-yl)methyl]phenyl}-2-methylpropanoic acid(Non-covalent)

EKP.1: 15 residues within 4Å: Chain A: H.65, I.80, G.83, C.84, F.86, R.87, A.91, I.125, M.128, L.129, L.132, L.139, I.140, S.141, M.163 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:I.80, A:F.86, A:R.87, A:R.87, A:I.125, A:L.129, A:L.132, A:I.140 Hydrogen bonds: A:S.141 Water bridges: A:R.87

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Frkic, R.L. et al., PPAR gamma in Complex with an Antagonist and Inverse Agonist: a Tumble and Trap Mechanism of the Activation Helix. iScience (2018)

Release Date

2018-08-01

Peptides

Peroxisome proliferator-activated receptor gamma: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Peroxisome proliferator-activated receptor gamma