SMTL ID : 6c6z.2 (1 other biounit)

Crystal structure of potent neutralizing antibody CDC2-C2 in complex with MERS-CoV S1 RBD

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

hetero-1-1-1-mer

Ligands

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 3 residues within 4Å: Chain A: N.44, T.46, K.47 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.44, A:N.44, A:K.47 NAG.2: 5 residues within 4Å: Chain A: S.50, L.51, P.119, H.120, N.121 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:P.119, A:N.121 Water bridges: A:S.50, A:F.52

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, L. et al., Importance of Neutralizing Monoclonal Antibodies Targeting Multiple Antigenic Sites on the Middle East Respiratory Syndrome Coronavirus Spike Glycoprotein To Avoid Neutralization Escape. J. Virol. (2018)

Release Date

2018-01-31

Peptides

Spike protein: A
Antibody CDC2-C2 heavy chain: B
Antibody CDC2-C2 light chain: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
H

C
L

Spike protein

Antibody CDC2-C2 heavy chain

Antibody CDC2-C2 light chain

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