SMTL ID : 6caj.1

Electron cryo-microscopy of the eukaryotic translation initiation factor 2B from Homo sapiens

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-2-2-2-2-2-mer

Ligands

1 x C7B: 2-(4-chloranylphenoxy)-~{N}-[4-[2-(4-chloranylphenoxy)ethanoylamino]cyclohexyl]ethanamide(Non-covalent)

C7B.1: 18 residues within 4Å: Chain D: N.179, V.181, H.205, I.207, M.234, V.242 Chain E: V.177, L.179, L.485 Chain I: N.179, V.181, H.205, I.207, M.234, V.242 Chain J: V.177, L.179, L.485 9 PLIP interactions: 2 interactions with chain E, 2 interactions with chain D, 3 interactions with chain I, 2 interactions with chain J Hydrophobic interactions: E:V.177, E:L.179, D:I.207, D:V.242, I:V.181, I:I.207, I:V.242, J:V.177, J:L.179

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tsai, J.C. et al., Structure of the nucleotide exchange factor eIF2B reveals mechanism of memory-enhancing molecule. Science (2018)

Release Date

2018-04-11

Peptides

Translation initiation factor eIF-2B subunit epsilon: AF
Translation initiation factor eIF-2B subunit gamma: BG
Translation initiation factor eIF-2B subunit alpha: CH
Translation initiation factor eIF-2B subunit beta: DI
Translation initiation factor eIF-2B subunit delta: EJ

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

F
A

B
J

G
I

C
H

H
G

D
C

I
D

E
F

J
E

Translation initiation factor eIF-2B subunit epsilon

Translation initiation factor eIF-2B subunit gamma

Translation initiation factor eIF-2B subunit alpha

Translation initiation factor eIF-2B subunit beta

Translation initiation factor eIF-2B subunit delta

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