SMTL ID : 6caz.1

Crystal structure of a peptide deformylase from Legionella pneumophila

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

1 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)

MES.1: 10 residues within 4Å: Chain A: G.52, V.53, E.97, G.98, C.99, L.100, L.134, E.137, C.138, H.141 5 PLIP interactions: 5 interactions with chain A Water bridges: A:V.53, A:G.98, A:C.99, A:C.99 Salt bridges: A:E.137

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 6 residues within 4Å: Chain A: Q.59, C.99, L.100, H.141, H.145 Ligands: NI.3 Ligand excluded by PLIP

1 x NI: NICKEL (II) ION(Non-covalent)

NI.3: 5 residues within 4Å: Chain A: Q.59, C.99, H.141, H.145 Ligands: CL.2 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:C.99, A:H.141, A:H.145

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Edwards, T.E. et al., Crystal structure of a peptide deformylase from Legionella pneumophila. To Be Published

Release Date

2018-02-14

Peptides

Peptide deformylase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Peptide deformylase

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