SMTL ID : 6cb8.1 (2 other biounits)

Cryo-EM structure of the Gasdermin A3 membrane pore

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY 3.80 Å

Oligo State

homo-27-mer

Ligands

27 x CDL: CARDIOLIPIN(Non-covalent)

CDL.1: 5 residues within 4Å: Chain 0: L.191 Chain A: M.2, R.10, R.14, V.88 Ligand excluded by PLIP CDL.2: 5 residues within 4Å: Chain A: L.191 Chain B: M.2, R.10, R.14, V.88 Ligand excluded by PLIP CDL.3: 5 residues within 4Å: Chain B: L.191 Chain C: M.2, R.10, R.14, V.88 Ligand excluded by PLIP CDL.4: 5 residues within 4Å: Chain C: L.191 Chain D: M.2, R.10, R.14, V.88 Ligand excluded by PLIP CDL.5: 5 residues within 4Å: Chain D: L.191 Chain E: M.2, R.10, R.14, V.88 Ligand excluded by PLIP CDL.6: 5 residues within 4Å: Chain E: L.191 Chain F: M.2, R.10, R.14, V.88 Ligand excluded by PLIP CDL.7: 5 residues within 4Å: Chain F: L.191 Chain G: M.2, R.10, R.14, V.88 Ligand excluded by PLIP CDL.8: 5 residues within 4Å: Chain G: L.191 Chain H: M.2, R.10, R.14, V.88 Ligand excluded by PLIP CDL.9: 5 residues within 4Å: Chain H: L.191 Chain I: M.2, R.10, R.14, V.88 Ligand excluded by PLIP CDL.10: 5 residues within 4Å: Chain I: L.191 Chain J: M.2, R.10, R.14, V.88 Ligand excluded by PLIP CDL.11: 5 residues within 4Å: Chain J: L.191 Chain K: M.2, R.10, R.14, V.88 Ligand excluded by PLIP CDL.12: 5 residues within 4Å: Chain K: L.191 Chain L: M.2, R.10, R.14, V.88 Ligand excluded by PLIP CDL.13: 5 residues within 4Å: Chain L: L.191 Chain M: M.2, R.10, R.14, V.88 Ligand excluded by PLIP CDL.14: 5 residues within 4Å: Chain M: L.191 Chain N: M.2, R.10, R.14, V.88 Ligand excluded by PLIP CDL.15: 5 residues within 4Å: Chain N: L.191 Chain O: M.2, R.10, R.14, V.88 Ligand excluded by PLIP CDL.16: 5 residues within 4Å: Chain O: L.191 Chain P: M.2, R.10, R.14, V.88 Ligand excluded by PLIP CDL.17: 5 residues within 4Å: Chain P: L.191 Chain Q: M.2, R.10, R.14, V.88 Ligand excluded by PLIP CDL.18: 5 residues within 4Å: Chain Q: L.191 Chain R: M.2, R.10, R.14, V.88 Ligand excluded by PLIP CDL.19: 5 residues within 4Å: Chain R: L.191 Chain S: M.2, R.10, R.14, V.88 Ligand excluded by PLIP CDL.20: 5 residues within 4Å: Chain S: L.191 Chain T: M.2, R.10, R.14, V.88 Ligand excluded by PLIP CDL.21: 5 residues within 4Å: Chain T: L.191 Chain U: M.2, R.10, R.14, V.88 Ligand excluded by PLIP CDL.22: 5 residues within 4Å: Chain U: L.191 Chain V: M.2, R.10, R.14, V.88 Ligand excluded by PLIP CDL.23: 5 residues within 4Å: Chain V: L.191 Chain W: M.2, R.10, R.14, V.88 Ligand excluded by PLIP CDL.24: 5 residues within 4Å: Chain W: L.191 Chain X: M.2, R.10, R.14, V.88 Ligand excluded by PLIP CDL.25: 5 residues within 4Å: Chain X: L.191 Chain Y: M.2, R.10, R.14, V.88 Ligand excluded by PLIP CDL.26: 5 residues within 4Å: Chain Y: L.191 Chain Z: M.2, R.10, R.14, V.88 Ligand excluded by PLIP CDL.27: 5 residues within 4Å: Chain 0: M.2, R.10, R.14, V.88 Chain Z: L.191 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ruan, J. et al., Cryo-EM structure of the gasdermin A3 membrane pore. Nature (2018)

Release Date

2018-04-25

Peptides

Gasdermin-A3: ABCDEFGHIJKLMNOPQRSTUVWXYZ0

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

E
A

F
A

G
A

H
A

I
A

J
A

K
A

L
A

M
A

N
A

O
A

P
A

Q
A

R
A

S
A

T
A

U
A

V
A

W
A

X
A

Y
A

Z
A

0
A

Membrane

We predict this structure to be a membrane protein.
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Gasdermin-A3

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