SMTL ID : 6cds.2 (1 other biounit)

Human neurofibromin 2/merlin/schwannomin residues 1-339 in complex with PIP2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.62 Å

Oligo State

monomer

Ligands

1 x PIO: [(2R)-2-octanoyloxy-3-[oxidanyl-[(1R,2R,3S,4R,5R,6S)-2,3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-propyl] octanoate(Non-covalent)

PIO.1: 8 residues within 4Å: Chain A: F.47, R.57, T.59, W.60, D.305, L.306, R.309, R.310 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.309 Salt bridges: A:R.309

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.2: 7 residues within 4Å: Chain A: Q.212, L.214, E.215, Y.217, V.219, D.237, L.239 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Q.212 Water bridges: A:Y.217, A:D.237, A:D.237

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 4 residues within 4Å: Chain A: Y.101, V.219, N.220, Y.221 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Y.101, A:Y.101, A:Y.221, A:Y.221

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.4: 1 residues within 4Å: Chain A: K.329 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.329

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chinthalapudi, K. et al., Lipid binding promotes the open conformation and tumor-suppressive activity of neurofibromin 2. Nat Commun (2018)

Release Date

2018-07-18

Peptides

Merlin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Merlin

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