SMTL ID : 6cjb.1

Crystal structure of Cystathionine beta-lyase from Legionella pneumophila Philadelphia 1 covalently bound to Pyridoxal phosphate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

homo-tetramer

Ligands

4 x FMT: FORMIC ACID(Non-functional Binders)

FMT.1: 7 residues within 4Å: Chain A: Y.109, N.157, K.207, S.336, L.337, T.351, R.371 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:N.157, A:N.157, A:S.336, A:T.351, A:R.371, A:R.371 FMT.2: 7 residues within 4Å: Chain B: Y.109, N.157, K.207, S.336, L.337, T.351, R.371 6 PLIP interactions: 6 interactions with chain B Hydrogen bonds: B:N.157, B:N.157, B:S.336, B:R.371, B:R.371 Water bridges: B:E.335 FMT.3: 7 residues within 4Å: Chain C: Y.109, N.157, K.207, S.336, L.337, T.351, R.371 6 PLIP interactions: 6 interactions with chain C Hydrogen bonds: C:N.157, C:N.157, C:S.336, C:R.371, C:R.371 Water bridges: C:E.335 FMT.5: 7 residues within 4Å: Chain D: Y.109, N.157, K.207, S.336, L.337, T.351, R.371 5 PLIP interactions: 5 interactions with chain D Hydrogen bonds: D:N.157, D:N.157, D:S.336, D:R.371, D:R.371

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.4: 3 residues within 4Å: Chain C: E.319, D.320, R.323 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Abendroth, J. et al., Crystal structure of Cystathionine beta-lyase from Legionella pneumophila Philadelphia 1 covalently bound to Pyridoxal phosphate. to be published

Release Date

2018-03-21

Peptides

Cystathionine beta-lyase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Cystathionine beta-lyase

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