SMTL ID : 6cjj.1

Candida albicans Hsp90 nucleotide binding domain in complex with ADP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.74 Å

Oligo State

monomer

Ligands

2 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 3 residues within 4Å: Chain A: N.52, G.138 Ligands: ADP.3 No protein-ligand interaction detected (PLIP) MG.2: 4 residues within 4Å: Chain A: Q.70, H.155, N.156, D.157 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.157, H2O.3

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.3: 17 residues within 4Å: Chain A: N.52, A.53, A.56, D.94, I.97, G.98, M.99, N.107, L.108, G.136, V.137, G.138, F.139, Y.140, T.186, L.188 Ligands: MG.1 12 PLIP interactions: 12 interactions with chain A Hydrogen bonds: A:N.52, A:D.94, A:V.137, A:G.138, A:F.139 Water bridges: A:A.53, A:D.55, A:A.56, A:D.94, A:G.96, A:G.98, A:N.107

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.4: 6 residues within 4Å: Chain A: V.209, K.210, S.213, E.214, V.216, I.220 2 PLIP interactions: 2 interactions with chain A Water bridges: A:V.216, A:I.220 EDO.5: 9 residues within 4Å: Chain A: R.47, I.50, S.51, S.54, D.55, H.212, S.213, F.215, V.216 4 PLIP interactions: 4 interactions with chain A Water bridges: A:S.51, A:S.51, A:S.51, A:F.215 EDO.6: 6 residues within 4Å: Chain A: I.82, P.83, Q.84, K.85, V.223, T.225 5 PLIP interactions: 5 interactions with chain A Water bridges: A:P.83, A:K.85, A:K.85, A:D.86, A:T.225

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Whitesell, L. et al., Structural basis for species-selective targeting of Hsp90 in a pathogenic fungus. Nat Commun (2019)

Release Date

2019-01-30

Peptides

Heat shock protein 90 homolog: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Heat shock protein 90 homolog

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