SMTL ID : 6ck8.3 (2 other biounits)

Crystal structure of anti-influenza single-domain llama antibody SD38

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

monomer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 2 residues within 4Å: Chain A: R.53, R.101 3 PLIP interactions: 3 interactions with chain A Water bridges: A:D.54 Salt bridges: A:R.53, A:R.101 SO4.2: 4 residues within 4Å: Chain A: R.53, L.99, Y.100, R.101 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:L.99, A:R.101 Salt bridges: A:R.53 SO4.3: 4 residues within 4Å: Chain A: Y.59, K.64, G.65, F.67 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:G.65, A:F.67 SO4.4: 3 residues within 4Å: Chain A: S.7, G.8, G.9 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:G.8, A:G.9

1 x 1PE: PENTAETHYLENE GLYCOL(Non-functional Binders)

1PE.5: 6 residues within 4Å: Chain A: Q.39, R.45, L.94, W.114, G.115, K.116 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.45

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Laursen, N.S. et al., Universal protection against influenza infection by a multidomain antibody to influenza hemagglutinin. Science (2018)

Release Date

2018-11-14

Peptides

Llama antibody SD38: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

Llama antibody SD38

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