- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.68 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x DAN: 2-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURAMINIC ACID(Non-covalent)
- 2 x C5P: CYTIDINE-5'-MONOPHOSPHATE(Non-covalent)
C5P.2: 15 residues within 4Å:- Chain A: L.10, A.11, R.12, N.22, R.71, L.75, A.80, S.81, S.82, Q.104, P.105, T.106
- Chain B: R.165
- Ligands: DAN.1, CL.4
11 PLIP interactions:1 interactions with chain B, 10 interactions with chain A- Salt bridges: B:R.165, A:K.21
- Hydrogen bonds: A:R.12, A:R.12, A:R.12, A:N.22, A:R.71, A:R.71, A:L.75, A:T.106
- pi-Cation interactions: A:R.12
C5P.6: 15 residues within 4Å:- Chain A: R.165
- Chain B: L.10, A.11, R.12, N.22, R.71, L.75, A.80, S.81, S.82, Q.104, P.105, T.106
- Ligands: DAN.5, CL.8
11 PLIP interactions:10 interactions with chain B, 1 interactions with chain A- Hydrogen bonds: B:R.12, B:R.12, B:R.12, B:N.22, B:R.71, B:R.71, B:L.75, B:T.106
- Salt bridges: B:K.21, A:R.165
- pi-Cation interactions: B:R.12
- 2 x FLC: CITRATE ANION(Non-covalent)
FLC.3: 11 residues within 4Å:- Chain A: M.136, E.137, H.138, R.173, H.204
- Chain B: M.136, E.137, H.138, R.173, H.204
- Ligands: FLC.7
11 PLIP interactions:6 interactions with chain B, 5 interactions with chain A- Hydrogen bonds: B:E.137, B:H.138, B:H.138, A:E.137, A:H.138, A:H.138
- Salt bridges: B:R.173, B:H.204, B:H.204, A:H.138, A:H.204
FLC.7: 11 residues within 4Å:- Chain A: M.136, E.137, H.138, R.173, H.204
- Chain B: M.136, E.137, H.138, R.173, H.204
- Ligands: FLC.3
10 PLIP interactions:4 interactions with chain B, 6 interactions with chain A- Hydrogen bonds: B:E.137, B:H.138, A:E.137, A:H.138, A:H.138
- Salt bridges: B:H.138, B:H.204, A:R.173, A:H.204, A:H.204
- 2 x CL: CHLORIDE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Matthews, M.M. et al., Catalytic Cycle ofNeisseria meningitidisCMP-Sialic Acid Synthetase Illustrated by High-Resolution Protein Crystallography. Biochemistry (2019)
- Release Date
- 2019-03-06
- Peptides
- N-acylneuraminate cytidylyltransferase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
C
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.68 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x DAN: 2-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURAMINIC ACID(Non-covalent)
- 2 x C5P: CYTIDINE-5'-MONOPHOSPHATE(Non-covalent)
- 2 x FLC: CITRATE ANION(Non-covalent)
- 2 x CL: CHLORIDE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Matthews, M.M. et al., Catalytic Cycle ofNeisseria meningitidisCMP-Sialic Acid Synthetase Illustrated by High-Resolution Protein Crystallography. Biochemistry (2019)
- Release Date
- 2019-03-06
- Peptides
- N-acylneuraminate cytidylyltransferase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
C