- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.80 Å
- Oligo State
- homo-dimer
- Ligands
- 6 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
NAG.1: 5 residues within 4Å:- Chain A: S.6, P.8, Y.23, E.35, N.36
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:S.6, A:S.6, A:Y.23, A:E.35, A:N.36
NAG.2: 5 residues within 4Å:- Chain A: E.109, N.113, Y.116, R.185, F.189
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:N.113, A:R.185
NAG.3: 5 residues within 4Å:- Chain A: Y.371, Q.375, N.379, S.381, I.382
6 PLIP interactions:6 interactions with chain A- Hydrogen bonds: A:Y.371, A:Y.371, A:Q.375, A:N.379, A:S.381, A:I.382
NAG.6: 5 residues within 4Å:- Chain B: S.6, P.8, Y.23, E.35, N.36
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:S.6, B:S.6, B:E.35, B:N.36
NAG.7: 6 residues within 4Å:- Chain B: E.109, N.113, S.115, Y.116, R.185, F.189
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:S.115, B:S.115, B:Y.116, B:R.185
NAG.8: 4 residues within 4Å:- Chain B: Y.371, N.379, S.381, I.382
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:Y.371, B:Y.371, B:N.379, B:S.381, B:I.382
- 2 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)
HEM.4: 19 residues within 4Å:- Chain A: Y.117, A.168, F.169, A.171, Q.172, H.176, F.179, K.180, T.181, H.183, V.264, N.351, Y.354, H.355, W.356, H.357, L.360, V.416, Q.423
17 PLIP interactions:17 interactions with chain A,- Hydrophobic interactions: A:F.169, A:Q.172, A:Q.172, A:F.179, A:F.179, A:V.264, A:W.356, A:L.360, A:V.416
- Hydrogen bonds: A:Y.117, A:T.181, A:N.351, A:Q.423
- Salt bridges: A:H.183
- pi-Stacking: A:H.176, A:H.355
- Metal complexes: A:H.357
HEM.9: 18 residues within 4Å:- Chain B: Y.117, A.168, F.169, Q.172, H.176, F.179, K.180, T.181, H.183, V.264, N.351, Y.354, H.355, W.356, H.357, L.360, V.416, Q.423
19 PLIP interactions:19 interactions with chain B,- Hydrophobic interactions: B:F.169, B:Q.172, B:Q.172, B:F.179, B:V.264, B:Y.354, B:W.356, B:L.360, B:V.416
- Hydrogen bonds: B:Y.117, B:F.179, B:T.181, B:T.181, B:N.351, B:Q.423
- Salt bridges: B:H.183
- pi-Stacking: B:H.176, B:H.355
- Metal complexes: B:H.357
- 2 x S58: 1-PHENYLSULFONAMIDE-3-TRIFLUOROMETHYL-5-PARABROMOPHENYLPYRAZOLE(Non-covalent)
S58.5: 21 residues within 4Å:- Chain A: H.58, V.85, R.89, Q.161, V.318, L.321, S.322, Y.324, L.328, L.353, Y.354, W.356, R.482, A.485, F.487, M.491, V.492, G.495, A.496, S.499, L.500
13 PLIP interactions:13 interactions with chain A- Hydrophobic interactions: A:V.318, A:L.321, A:Y.324, A:F.487, A:V.492, A:V.492, A:A.496
- Hydrogen bonds: A:Q.161, A:S.322, A:R.482, A:F.487
- pi-Cation interactions: A:R.89
- Halogen bonds: A:R.89
S58.10: 21 residues within 4Å:- Chain B: H.58, V.85, R.89, Q.161, V.318, L.321, S.322, Y.324, L.328, L.353, Y.354, W.356, R.482, A.485, F.487, M.491, V.492, G.495, A.496, S.499, L.500
11 PLIP interactions:11 interactions with chain B- Hydrophobic interactions: B:V.318, B:L.321, B:F.487, B:V.492, B:V.492
- Hydrogen bonds: B:Q.161, B:S.322, B:Y.324, B:R.482, B:F.487
- Halogen bonds: B:R.89
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kurumbail, R.G. et al., Structural basis for selective inhibition of cyclooxygenase-2 by anti-inflammatory agents. Nature (1996)
- Release Date
- 1997-12-24
- Peptides
- CYCLOOXYGENASE-2: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.80 Å
- Oligo State
- homo-dimer
- Ligands
- 6 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- 2 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)
- 2 x S58: 1-PHENYLSULFONAMIDE-3-TRIFLUOROMETHYL-5-PARABROMOPHENYLPYRAZOLE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kurumbail, R.G. et al., Structural basis for selective inhibition of cyclooxygenase-2 by anti-inflammatory agents. Nature (1996)
- Release Date
- 1997-12-24
- Peptides
- CYCLOOXYGENASE-2: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B