SMTL ID : 6ct8.1

Selenomethionine structure of N-truncated R2-type pyocin tail fiber at 2.6 angstrom resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.62 Å

Oligo State

homo-trimer

Ligands

3 x NI: NICKEL (II) ION(Non-covalent)

NI.1: 8 residues within 4Å: Chain A: H.144, H.146 Chain B: H.144, H.146 Chain C: H.144, H.146 Ligands: NI.2, NI.3 6 PLIP interactions: 2 interactions with chain C, 2 interactions with chain B, 2 interactions with chain A Metal complexes: C:H.144, C:H.146, B:H.144, B:H.146, A:H.144, A:H.146 NI.2: 8 residues within 4Å: Chain A: H.144, H.146 Chain B: H.144, H.146 Chain C: H.144, H.146 Ligands: NI.1, NI.3 6 PLIP interactions: 2 interactions with chain C, 2 interactions with chain B, 2 interactions with chain A Metal complexes: C:H.144, C:H.146, B:H.144, B:H.146, A:H.144, A:H.146 NI.3: 8 residues within 4Å: Chain A: H.144, H.146 Chain B: H.144, H.146 Chain C: H.144, H.146 Ligands: NI.1, NI.2 6 PLIP interactions: 2 interactions with chain C, 2 interactions with chain B, 2 interactions with chain A Metal complexes: C:H.144, C:H.146, B:H.144, B:H.146, A:H.144, A:H.146

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Salazar, A.J. et al., R pyocin tail fiber structure reveals a receptor-binding domain with a lectin fold. PLoS ONE (2019)

Release Date

2019-02-20

Peptides

R2-type pyocin: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

R2-type pyocin

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