SMTL ID : 6cth.1

Crystal Structure of Pathogenesis-related Protein 1G (PR-1G) Kinase Domain from Cacao

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

1 x FE7: N-{(3Z)-2-oxo-3-[phenyl({4-[(piperidin-1-yl)methyl]phenyl}amino)methylidene]-2,3-dihydro-1H-indol-5-yl}ethanesulfonamide(Non-covalent)

FE7.1: 19 residues within 4Å: Chain A: L.23, G.24, G.26, G.27, V.31, A.44, K.46, Y.91, E.92, F.93, M.94, A.95, G.97, S.98, S.145, N.146, M.148, G.158, D.159 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:V.31, A:V.31, A:Y.91, A:Y.91, A:F.93 Hydrogen bonds: A:G.27, A:E.92, A:M.94, A:M.94 Water bridges: A:K.46

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 2 residues within 4Å: Chain A: D.141, D.159 6 PLIP interactions: 2 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:D.141, A:D.159, H2O.1, H2O.3, H2O.3, H2O.5

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.3: 3 residues within 4Å: Chain A: L.293, P.294, N.295 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:L.293, A:N.295

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tosarini, T.R. et al., Crystal Structure of Pathogenesis-related Protein 1G (PR-1G) Kinase Domain from Cacao. To Be Published

Release Date

2018-04-11

Peptides

Concanavalin A-like lectin protein kinase family protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Concanavalin A-like lectin protein kinase family protein