SMTL ID : 6cxc.1

3.9A Cryo-EM structure of murine antibody bound at a novel epitope of respiratory syncytial virus fusion protein

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-3-3-6-mer

Ligands

6 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)(Non-covalent)

NAG.1: 1 residues within 4Å: Chain G: N.45 No protein-ligand interaction detected (PLIP) NAG.2: 1 residues within 4Å: Chain H: N.475 No protein-ligand interaction detected (PLIP) NAG.3: 2 residues within 4Å: Chain I: C.44, N.45 No protein-ligand interaction detected (PLIP) NAG.4: 2 residues within 4Å: Chain J: N.471, N.475 No protein-ligand interaction detected (PLIP) NAG.5: 2 residues within 4Å: Chain K: C.44, N.45 No protein-ligand interaction detected (PLIP) NAG.6: 1 residues within 4Å: Chain L: N.475 1 PLIP interactions: 1 interactions with chain L Hydrogen bonds: L:N.475

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xie, Q. et al., Structure basis of neutralization by a novel site II/IV antibody against respiratory syncytial virus fusion protein. Plos One (2019)

Release Date

2019-07-31

Peptides

R4.C6 Fab Heavy Chain: ACE
R4.C6 Fab Light Chain: BDF
Fusion glycoprotein F0, Envelope glycoprotein chimera: GHIJKL

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
X

C
G

E
I

B
Y

D
J

F
K

G
A

H
B

I
C

J
D

K
E

L
F

R4.C6 Fab Heavy Chain

R4.C6 Fab Light Chain

Fusion glycoprotein F0, Envelope glycoprotein chimera