SMTL ID : 6cxm.1 (1 other biounit)

Crystal structure of a dihydrofolate reductase from Mycobacterium smegmatis in complex with NADP and P218

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.65 Å

Oligo State

monomer

Ligands

1 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NAP.1: 26 residues within 4Å: Chain A: W.15, A.16, I.23, G.24, R.25, N.27, S.28, I.29, G.52, R.53, L.54, T.55, S.58, V.74, T.75, R.76, T.89, I.100, G.101, G.102, A.103, Q.104, I.105, Y.106, M.108 Ligands: MMV.2 21 PLIP interactions: 21 interactions with chain A Hydrophobic interactions: A:I.23 Hydrogen bonds: A:A.16, A:I.23, A:G.52, A:R.53, A:L.54, A:T.55, A:S.58, A:S.58, A:T.75, A:R.76, A:R.76, A:G.101, A:G.102, A:A.103, A:Q.104, A:Q.104, A:Q.104, A:I.105 Salt bridges: A:R.53, A:R.76

1 x MMV: 3-(2-{3-[(2,4-diamino-6-ethylpyrimidin-5-yl)oxy]propoxy}phenyl)propanoic acid(Non-covalent)

MMV.2: 17 residues within 4Å: Chain A: I.14, W.15, A.16, I.29, D.36, L.37, F.40, L.59, P.60, V.63, L.66, P.67, R.69, I.100, Y.106, T.119 Ligands: NAP.1 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:I.29, A:L.37, A:F.40, A:P.60, A:V.63, A:L.66 Hydrogen bonds: A:I.14, A:Y.106, A:T.119, A:T.119 Salt bridges: A:D.36, A:K.41, A:R.69

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Edwards, T.E. et al., Crystal structure of a dihydrofolate reductase from Mycobacterium smegmatis in complex with NADP and P218. To Be Published

Release Date

2018-04-11

Peptides

Dihydrofolate reductase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Dihydrofolate reductase

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