SMTL ID : 6cya.1

Rotavirus SA11 NSP2 S313A mutant

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

homo-octamer

Ligands

8 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 3 residues within 4Å: Chain A: S.198, D.199, V.200 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:D.199, A:D.199, A:D.199, A:V.200 GOL.3: 3 residues within 4Å: Chain B: S.198, D.199, V.200 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:D.199, B:D.199, B:D.199, B:V.200 GOL.5: 3 residues within 4Å: Chain C: S.198, D.199, V.200 4 PLIP interactions: 4 interactions with chain C Hydrogen bonds: C:D.199, C:D.199, C:D.199, C:V.200 GOL.7: 3 residues within 4Å: Chain D: S.198, D.199, V.200 4 PLIP interactions: 4 interactions with chain D Hydrogen bonds: D:D.199, D:D.199, D:D.199, D:V.200 GOL.9: 3 residues within 4Å: Chain E: S.198, D.199, V.200 3 PLIP interactions: 3 interactions with chain E Hydrogen bonds: E:D.199, E:D.199, E:V.200 GOL.11: 3 residues within 4Å: Chain F: S.198, D.199, V.200 3 PLIP interactions: 3 interactions with chain F Hydrogen bonds: F:D.199, F:D.199, F:V.200 GOL.13: 3 residues within 4Å: Chain G: S.198, D.199, V.200 3 PLIP interactions: 3 interactions with chain G Hydrogen bonds: G:D.199, G:D.199, G:V.200 GOL.15: 3 residues within 4Å: Chain H: S.198, D.199, V.200 3 PLIP interactions: 3 interactions with chain H Hydrogen bonds: H:D.199, H:D.199, H:V.200

8 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 6 residues within 4Å: Chain A: T.220, H.221, G.222, K.223, H.225, R.227 Ligand excluded by PLIP CL.4: 6 residues within 4Å: Chain B: T.220, H.221, G.222, K.223, H.225, R.227 Ligand excluded by PLIP CL.6: 6 residues within 4Å: Chain C: T.220, H.221, G.222, K.223, H.225, R.227 Ligand excluded by PLIP CL.8: 6 residues within 4Å: Chain D: T.220, H.221, G.222, K.223, H.225, R.227 Ligand excluded by PLIP CL.10: 6 residues within 4Å: Chain E: T.220, H.221, G.222, K.223, H.225, R.227 Ligand excluded by PLIP CL.12: 6 residues within 4Å: Chain F: T.220, H.221, G.222, K.223, H.225, R.227 Ligand excluded by PLIP CL.14: 6 residues within 4Å: Chain G: T.220, H.221, G.222, K.223, H.225, R.227 Ligand excluded by PLIP CL.16: 6 residues within 4Å: Chain H: T.220, H.221, G.222, K.223, H.225, R.227 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Criglar, J.M. et al., Phosphorylation cascade regulates the formation and maturation of rotaviral replication factories. Proc. Natl. Acad. Sci. U.S.A. (2018)

Release Date

2018-12-05

Peptides

Non-structural protein 2: ABCDEFGH

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

E
A

F
A

G
A

H
A

Non-structural protein 2