SMTL ID : 6cyz.1

Mycobacterial homoserine kinase ThrB in complex with AMPPNP

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.04 Å

Oligo State

homo-dimer

Ligands

2 x ANP: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER(Covalent)(Non-covalent)

ANP.1: 19 residues within 4Å: Chain A: D.39, E.61, V.62, P.63, H.68, L.69, V.70, N.94, P.97, H.98, S.99, R.100, G.101, L.102, G.103, S.104, S.105, A.108, G.270 16 PLIP interactions: 16 interactions with chain A Hydrogen bonds: A:P.97, A:S.99, A:S.99, A:R.100, A:G.101, A:G.103, A:S.104, A:S.104, A:S.105, A:S.105, A:G.270 Water bridges: A:N.94, A:N.94, A:L.102, A:A.106, A:N.146 ANP.3: 20 residues within 4Å: Chain B: D.39, E.61, V.62, P.63, H.68, L.69, V.70, N.94, P.97, H.98, S.99, R.100, G.101, L.102, G.103, S.104, S.105, A.106, A.108, G.270 19 PLIP interactions: 19 interactions with chain B Hydrogen bonds: B:S.99, B:S.99, B:G.101, B:G.101, B:G.103, B:S.104, B:S.104, B:S.105, B:S.105, B:G.270 Water bridges: B:L.69, B:N.94, B:N.94, B:N.94, B:N.94, B:R.100, B:R.100, B:N.146 pi-Cation interactions: B:H.98

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 4 residues within 4Å: Chain A: M.247, P.248, A.249, S.250 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, J. et al., Mycobacterial homoserine kinase ThrB. To Be Published

Release Date

2018-04-18

Peptides

Homoserine kinase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Homoserine kinase