- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.71 Å
- Oligo State
- hetero-1-1-mer
- Ligands
- 5 x SF4: IRON/SULFUR CLUSTER(Non-covalent)
- 2 x MGD: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE(Non-covalent)
MGD.2: 40 residues within 4Å:- Chain A: C.24, T.25, R.58, R.125, C.153, A.154, F.184, G.185, A.186, D.187, A.190, S.191, N.192, R.193, V.195, V.214, D.215, P.216, R.217, I.231, P.233, G.234, D.236, S.333, R.334, G.335, A.336, Q.339, V.681, D.682, Q.683, K.684, S.685, R.686, L.687, N.688, E.690, Y.804
- Ligands: MGD.3, MO.4
31 PLIP interactions:31 interactions with chain A- Hydrogen bonds: A:R.58, A:R.58, A:A.190, A:S.191, A:N.192, A:N.192, A:N.192, A:V.214, A:D.215, A:D.215, A:R.217, A:R.217, A:G.234, A:S.333, A:R.334, A:R.334, A:G.335, A:Q.339, A:S.685, A:E.690
- Water bridges: A:R.58, A:S.191, A:S.191, A:R.193, A:K.684, A:N.688, A:Y.804
- Salt bridges: A:R.193, A:D.215, A:D.236, A:K.684
MGD.3: 39 residues within 4Å:- Chain A: G.124, R.125, H.149, V.152, C.153, R.334, Y.440, F.441, N.442, N.443, F.444, F.446, S.447, N.448, H.466, I.467, T.468, T.469, N.470, S.472, S.484, S.485, H.486, H.487, D.521, D.682, K.684, E.690, G.691, R.692, F.762, Y.769, N.786, N.787, I.790, F.803, Y.804
- Ligands: MGD.2, MO.4
34 PLIP interactions:34 interactions with chain A- Hydrogen bonds: A:R.125, A:R.334, A:F.441, A:N.443, A:N.443, A:N.443, A:S.447, A:S.447, A:I.467, A:T.468, A:T.469, A:S.472, A:S.472, A:S.484, A:H.487, A:H.487, A:K.684, A:G.691, A:N.787, A:N.787, A:Y.804
- Water bridges: A:Q.65, A:Q.683, A:R.692, A:R.692, A:Y.804
- Salt bridges: A:H.149, A:D.521, A:D.682, A:R.692
- pi-Stacking: A:F.441, A:F.762, A:F.803
- pi-Cation interactions: A:F.441
- 1 x MO: MOLYBDENUM ATOM(Non-covalent)
- 5 x FMT: FORMIC ACID(Non-functional Binders)
FMT.5: 7 residues within 4Å:- Chain A: Q.22, G.23, Q.65, H.486, H.487, K.689, R.692
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:Q.65, A:Q.65, A:R.692, A:R.692
- Water bridges: A:K.689
FMT.6: 4 residues within 4Å:- Chain A: P.697, Y.700, Y.772, R.782
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:R.782, A:R.782
FMT.7: 3 residues within 4Å:- Chain A: Y.605, K.606, A.609
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:K.606
- Water bridges: A:N.369, A:Y.605
FMT.14: 6 residues within 4Å:- Chain B: Q.84, N.85, N.86, D.87, Y.152, P.153
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:N.86, B:D.87, B:D.87
FMT.15: 5 residues within 4Å:- Chain B: H.207, K.208, P.209, I.225, R.226
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:K.208, B:R.226
- 1 x PG5: 1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE(Non-covalent)
- 1 x PO4: PHOSPHATE ION(Non-functional Binders)
PO4.9: 8 residues within 4Å:- Chain A: R.125, Y.126, H.149, S.150, C.153, E.155, K.158, Y.170
15 PLIP interactions:15 interactions with chain A- Hydrogen bonds: A:Y.126, A:Y.126, A:Y.126, A:S.150, A:E.155, A:E.155, A:Y.170
- Water bridges: A:R.123, A:R.123, A:R.125, A:S.148, A:K.158, A:K.158, A:K.158
- Salt bridges: A:K.158
- 1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Glasser, N.R. et al., Structural and mechanistic analysis of the arsenate respiratory reductase provides insight into environmental arsenic transformations. Proc. Natl. Acad. Sci. U.S.A. (2018)
- Release Date
- 2018-08-15
- Peptides
- ArrA: A
4Fe-4S ferredoxin, iron-sulfur binding domain protein: B - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.71 Å
- Oligo State
- hetero-1-1-mer
- Ligands
- 5 x SF4: IRON/SULFUR CLUSTER(Non-covalent)
- 2 x MGD: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE(Non-covalent)
- 1 x MO: MOLYBDENUM ATOM(Non-covalent)
- 5 x FMT: FORMIC ACID(Non-functional Binders)
- 1 x PG5: 1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE(Non-covalent)
- 1 x PO4: PHOSPHATE ION(Non-functional Binders)
- 1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Glasser, N.R. et al., Structural and mechanistic analysis of the arsenate respiratory reductase provides insight into environmental arsenic transformations. Proc. Natl. Acad. Sci. U.S.A. (2018)
- Release Date
- 2018-08-15
- Peptides
- ArrA: A
4Fe-4S ferredoxin, iron-sulfur binding domain protein: B - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
D