SMTL ID : 6d0y.1

X-ray Crystal Structure of PGC-1beta C-terminus bound to the CBP80-CBP20 Cap Binding Complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.68 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 5 residues within 4Å: Chain A: K.685, Q.738, Y.739, V.741, T.742 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:T.742

1 x GTA: P1-7-METHYLGUANOSINE-P3-ADENOSINE-5',5'-TRIPHOSPHATE(Non-covalent)

GTA.2: 19 residues within 4Å: Chain B: Y.40, D.42, Y.63, F.103, F.105, R.132, D.134, W.135, D.136, A.137, R.143, Y.145, G.146, R.147, G.148, Q.153, V.154, R.155, Y.158 23 PLIP interactions: 23 interactions with chain B Hydrogen bonds: B:Y.40, B:D.42, B:R.132, B:R.132, B:D.134, B:W.135, B:R.143, B:R.143, B:R.143, B:R.147, B:G.148, B:Q.153, B:V.154 Water bridges: B:R.41, B:A.137 Salt bridges: B:D.134, B:D.136, B:R.147 pi-Stacking: B:Y.40, B:Y.63, B:Y.63, B:Y.158, B:Y.158

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cho, H. et al., Transcriptional coactivator PGC-1 alpha contains a novel CBP80-binding motif that orchestrates efficient target gene expression. Genes Dev. (2018)

Release Date

2018-04-25

Peptides

Nuclear cap-binding protein subunit 1: A
Nuclear cap-binding protein subunit 2: B
Peroxisome proliferator-activated receptor gamma coactivator 1-beta: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
A

C
B

Nuclear cap-binding protein subunit 1

Nuclear cap-binding protein subunit 2

Peroxisome proliferator-activated receptor gamma coactivator 1-beta