SMTL ID : 6d1q.1

Crystal structure of E. coli RppH-DapF complex, monomer

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.15 Å

Oligo State

hetero-1-1-mer

Ligands

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 4 residues within 4Å: Chain A: G.77, A.78, R.79, C.80 Ligand excluded by PLIP CL.3: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 4 residues within 4Å: Chain A: G.89 Chain B: K.150, A.153, S.154 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.88

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gao, A. et al., Structural and kinetic insights into stimulation of RppH-dependent RNA degradation by the metabolic enzyme DapF. Nucleic Acids Res. (2018)

Release Date

2018-05-23

Peptides

Diaminopimelate epimerase: A
RNA pyrophosphohydrolase: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Diaminopimelate epimerase

RNA pyrophosphohydrolase

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