SMTL ID : 6d30.1

Structure of human Usb1 with uridine-uridine, inactive H208Q mutant

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.17 Å

Oligo State

monomer

Ligands

1 x U- U: RNA (5'-R(UP*U)-3')(Non-covalent)

U-U.1: 19 residues within 4Å: Chain A: H.10, M.42, K.43, V.44, F.45, H.46, S.48, Y.87, T.88, N.89, Q.90, F.96, F.127, Y.128, D.130, P.131, S.132, Q.134, S.136 Protein-ligand interaction information (PLIP) not available

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 3 residues within 4Å: Chain A: V.36, P.37, R.38 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nomura, Y. et al., Structural and mechanistic basis for preferential deadenylation of U6 snRNA by Usb1. Nucleic Acids Res. (2018)

Release Date

2018-09-05

Peptides

U6 snRNA phosphodiesterase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

U6 snRNA phosphodiesterase

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