SMTL ID : 6d38.1

Photodissociable dimeric Dronpa green fluorescent protein variant M (pdDronpaM)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

homo-dimer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: N.56, G.57, R.156, T.158 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.57, A:R.156, A:G.157, A:T.158 SO4.2: 7 residues within 4Å: Chain A: N.129, Y.130, E.131, R.205, C.206, D.207 Chain B: K.209 2 PLIP interactions: 1 interactions with chain A, 1 interactions with chain B Salt bridges: A:R.205, B:K.209 SO4.3: 4 residues within 4Å: Chain B: N.56, G.57, R.156, T.158 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:G.57, B:R.156, B:G.157, B:T.158 SO4.4: 7 residues within 4Å: Chain A: K.209 Chain B: N.129, Y.130, E.131, R.205, C.206, D.207 2 PLIP interactions: 1 interactions with chain A, 1 interactions with chain B Salt bridges: A:K.209, B:R.205

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhou, X.X. et al., Optical control of cell signaling by single-chain photoswitchable kinases. Science (2017)

Release Date

2018-05-16

Peptides

Fluorescent protein Dronpa: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Fluorescent protein Dronpa