SMTL ID : 6d3g.2 (3 other biounits)

PER-2 class A extended-spectrum beta-lactamase crystal structure in complex with avibactam at 2.4 Angstrom resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

monomer

Ligands

1 x NXL: (2S,5R)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamide(Covalent)

NXL.1: 13 residues within 4Å: Chain A: Q.46, S.47, K.50, W.84, S.111, N.113, E.147, H.151, T.197, K.215, T.216, G.217, T.218 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:W.84 Hydrogen bonds: A:S.47, A:S.111, A:N.113, A:T.216, A:T.218, A:T.218, A:T.218 Salt bridges: A:K.215

1 x PG4: TETRAETHYLENE GLYCOL(Non-functional Binders)

PG4.2: 3 residues within 4Å: Chain A: K.42, Y.158, W.161 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.42

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ruggiero, M. et al., Structural Insights into the Inhibition of the Extended-Spectrum beta-Lactamase PER-2 by Avibactam. Antimicrob.Agents Chemother. (2019)

Release Date

2019-04-24

Peptides

Beta-lactamase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Beta-lactamase

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